Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Mir1897-201ENSMUST00000122581 272 ntBASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Mir8102-201ENSMUST00000184148 139 ntBASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Gm20949-201ENSMUST00000206478 952 ntBASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Pcdha3Q91Y16 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Mir7684-201ENSMUST00000183858 60 ntBASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Gm38294-201ENSMUST00000192831 381 ntBASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha3Q91Y16 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Gm3436-201ENSMUST00000179930 840 ntBASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Gm46209-201ENSMUST00000217912 553 ntBASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha3Q91Y16 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms