Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Gm22175-201ENSMUST00000175007 78 ntBASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Gm29741-201ENSMUST00000192667 421 ntBASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb1Q91Y08 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Gm15460-201ENSMUST00000118147 391 ntBASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Gm46209-201ENSMUST00000217912 553 ntBASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Gm9229-201ENSMUST00000222777 126 ntBASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb1Q91Y08 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Pcdhb1Q91Y08 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms