Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Gm4535-201ENSMUST00000182274 558 ntBASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Gm10355-201ENSMUST00000097146 517 ntBASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf4Q8K4J2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Gm12895-201ENSMUST00000122214 226 ntBASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Gm7284-201ENSMUST00000131667 944 ntBASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Gm27704-201ENSMUST00000185094 107 ntBASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ebf4Q8K4J2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ebf4Q8K4J2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms