Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.22□□□□□ -0.29
Clrn1Q8K445 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.22□□□□□ -0.29
Clrn1Q8K445 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Gm17837-201ENSMUST00000186435 985 ntBASIC13.22□□□□□ -0.29
Clrn1Q8K445 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.22□□□□□ -0.29
Clrn1Q8K445 Gm6916-202ENSMUST00000205523 195 ntBASIC13.22□□□□□ -0.29
Clrn1Q8K445 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.22□□□□□ -0.29
Clrn1Q8K445 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.22□□□□□ -0.29
Clrn1Q8K445 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn1Q8K445 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Clrn1Q8K445 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.21□□□□□ -0.29
Clrn1Q8K445 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Mir6956-201ENSMUST00000183598 62 ntBASIC13.21□□□□□ -0.29
Clrn1Q8K445 Gm6888-201ENSMUST00000221983 706 ntBASIC13.21□□□□□ -0.29
Clrn1Q8K445 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.21□□□□□ -0.29
Clrn1Q8K445 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.21□□□□□ -0.29
Clrn1Q8K445 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clrn1Q8K445 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clrn1Q8K445 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn1Q8K445 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.2□□□□□ -0.3
Clrn1Q8K445 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Clrn1Q8K445 Gm15653-201ENSMUST00000119247 907 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms