Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Eri3Q8C460 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Eri3Q8C460 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.32□□□□□ -0.28
Eri3Q8C460 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.32□□□□□ -0.28
Eri3Q8C460 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.32□□□□□ -0.28
Eri3Q8C460 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Gm18027-201ENSMUST00000218947 619 ntBASIC13.32□□□□□ -0.28
Eri3Q8C460 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Eri3Q8C460 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.32□□□□□ -0.28
Eri3Q8C460 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.32□□□□□ -0.28
Eri3Q8C460 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Eri3Q8C460 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Gm37714-201ENSMUST00000194742 342 ntBASIC13.31□□□□□ -0.28
Eri3Q8C460 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.31□□□□□ -0.28
Eri3Q8C460 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Eri3Q8C460 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Eri3Q8C460 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.3□□□□□ -0.28
Eri3Q8C460 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.3□□□□□ -0.28
Eri3Q8C460 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Eri3Q8C460 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Eri3Q8C460 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Eri3Q8C460 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Eri3Q8C460 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Eri3Q8C460 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Eri3Q8C460 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Eri3Q8C460 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Eri3Q8C460 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Eri3Q8C460 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Eri3Q8C460 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms