Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Mir1897-201ENSMUST00000122581 272 ntBASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Gm27618-201ENSMUST00000183671 60 ntBASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Gm13616-201ENSMUST00000120600 222 ntBASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Gm22175-201ENSMUST00000175007 78 ntBASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Gm27622-201ENSMUST00000183779 60 ntBASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Shd-206ENSMUST00000225145 998 ntBASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sh3rf3Q8C120 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Gm27533-201ENSMUST00000183800 152 ntBASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf3Q8C120 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf3Q8C120 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf3Q8C120 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf3Q8C120 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Sh3rf3Q8C120 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf3Q8C120 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf3Q8C120 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf3Q8C120 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf3Q8C120 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms