Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Samm50Q8BGH2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Gm18049-201ENSMUST00000208909 581 ntBASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Samm50Q8BGH2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Gm10576-201ENSMUST00000191927 825 ntBASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Samm50Q8BGH2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Gm8584-201ENSMUST00000171982 758 ntBASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Samm50Q8BGH2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms