Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp8Q80U87 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Usp8Q80U87 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp8Q80U87 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp8Q80U87 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp8Q80U87 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp8Q80U87 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.06□□□□□ -0.16
Usp8Q80U87 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp8Q80U87 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.06□□□□□ -0.16
Usp8Q80U87 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp8Q80U87 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp8Q80U87 Gm10275-202ENSMUST00000168697 495 ntBASIC14.06□□□□□ -0.16
Usp8Q80U87 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
Usp8Q80U87 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Gm10275-201ENSMUST00000092620 635 ntBASIC14.06□□□□□ -0.16
Usp8Q80U87 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp8Q80U87 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.06□□□□□ -0.16
Usp8Q80U87 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp8Q80U87 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp8Q80U87 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.05□□□□□ -0.16
Usp8Q80U87 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Gm27525-201ENSMUST00000184465 107 ntBASIC14.05□□□□□ -0.16
Usp8Q80U87 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp8Q80U87 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp8Q80U87 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.04□□□□□ -0.16
Usp8Q80U87 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.04□□□□□ -0.16
Usp8Q80U87 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp8Q80U87 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.04□□□□□ -0.16
Usp8Q80U87 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp8Q80U87 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.04□□□□□ -0.16
Usp8Q80U87 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp8Q80U87 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms