Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Ank2-226ENSMUST00000189368 339 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44357-201ENSMUST00000195897 142 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm19658-201ENSMUST00000196231 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44367-201ENSMUST00000196836 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44350-201ENSMUST00000197197 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44390-201ENSMUST00000197533 144 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44313-201ENSMUST00000198018 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44486-201ENSMUST00000198508 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44314-201ENSMUST00000199263 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44394-201ENSMUST00000199558 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44484-201ENSMUST00000199873 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44466-201ENSMUST00000200264 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm44359-201ENSMUST00000200671 138 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Gm6089-201ENSMUST00000197666 938 ntBASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.25□□□□□ -0.29
Rnf220Q6PDX6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Gm25990-201ENSMUST00000102440 86 ntBASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Gm7977-201ENSMUST00000193787 748 ntBASIC13.24□□□□□ -0.29
Rnf220Q6PDX6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms