Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ParpbpQ6IRT3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ParpbpQ6IRT3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ParpbpQ6IRT3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Gm13616-201ENSMUST00000120600 222 ntBASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Gm22175-201ENSMUST00000175007 78 ntBASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ParpbpQ6IRT3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Gm27430-201ENSMUST00000184585 107 ntBASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Gm44333-201ENSMUST00000197168 107 ntBASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ParpbpQ6IRT3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Gm27631-201ENSMUST00000184163 466 ntBASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Gm45453-201ENSMUST00000211758 853 ntBASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ParpbpQ6IRT3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms