Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
SspnQ62147 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SspnQ62147 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SspnQ62147 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SspnQ62147 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SspnQ62147 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Gm8584-201ENSMUST00000171982 758 ntBASIC11.73□□□□□ -0.53
SspnQ62147 Gm18737-201ENSMUST00000173594 937 ntBASIC11.73□□□□□ -0.53
SspnQ62147 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.73□□□□□ -0.53
SspnQ62147 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
SspnQ62147 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SspnQ62147 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
SspnQ62147 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
SspnQ62147 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.73□□□□□ -0.53
SspnQ62147 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SspnQ62147 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SspnQ62147 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 Gm11745-201ENSMUST00000121669 448 ntBASIC11.72□□□□□ -0.53
SspnQ62147 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.72□□□□□ -0.53
SspnQ62147 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Gm10275-202ENSMUST00000168697 495 ntBASIC11.72□□□□□ -0.53
SspnQ62147 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.72□□□□□ -0.53
SspnQ62147 Gm18057-201ENSMUST00000208220 503 ntBASIC11.72□□□□□ -0.53
SspnQ62147 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SspnQ62147 Gm10275-201ENSMUST00000092620 635 ntBASIC11.72□□□□□ -0.53
SspnQ62147 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SspnQ62147 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.72□□□□□ -0.53
SspnQ62147 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SspnQ62147 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SspnQ62147 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SspnQ62147 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SspnQ62147 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SspnQ62147 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
SspnQ62147 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SspnQ62147 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SspnQ62147 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SspnQ62147 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SspnQ62147 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SspnQ62147 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms