Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.77■□□□□ 0.28
Mre11Q61216 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Mre11Q61216 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Mre11Q61216 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Mre11Q61216 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.77■□□□□ 0.28
Mre11Q61216 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.77■□□□□ 0.28
Mre11Q61216 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Gm18246-201ENSMUST00000221023 728 ntBASIC16.77■□□□□ 0.28
Mre11Q61216 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Mre11Q61216 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Mre11Q61216 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mre11Q61216 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mre11Q61216 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mre11Q61216 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Mre11Q61216 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mre11Q61216 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mre11Q61216 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mre11Q61216 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mre11Q61216 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mre11Q61216 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mre11Q61216 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Mre11Q61216 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Mre11Q61216 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.76■□□□□ 0.27
Mre11Q61216 Gm45251-201ENSMUST00000209486 1465 ntBASIC16.76■□□□□ 0.27
Mre11Q61216 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Mre11Q61216 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.76■□□□□ 0.27
Mre11Q61216 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.76■□□□□ 0.27
Mre11Q61216 Gm10275-202ENSMUST00000168697 495 ntBASIC16.76■□□□□ 0.27
Mre11Q61216 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.76■□□□□ 0.27
Mre11Q61216 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.76■□□□□ 0.27
Mre11Q61216 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Gm10275-201ENSMUST00000092620 635 ntBASIC16.76■□□□□ 0.27
Mre11Q61216 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Mre11Q61216 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mre11Q61216 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Gm20554-201ENSMUST00000177421 2352 ntBASIC16.75■□□□□ 0.27
Mre11Q61216 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.75■□□□□ 0.27
Mre11Q61216 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.75■□□□□ 0.27
Mre11Q61216 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Mre11Q61216 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Mre11Q61216 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Mre11Q61216 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.75■□□□□ 0.27
Mre11Q61216 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.75■□□□□ 0.27
Mre11Q61216 Gm18515-201ENSMUST00000219755 797 ntBASIC16.75■□□□□ 0.27
Mre11Q61216 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.75■□□□□ 0.27
Mre11Q61216 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.75■□□□□ 0.27
Mre11Q61216 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.75■□□□□ 0.27
Mre11Q61216 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Mre11Q61216 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Mre11Q61216 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.75■□□□□ 0.27
Mre11Q61216 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mre11Q61216 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.74■□□□□ 0.27
Mre11Q61216 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.74■□□□□ 0.27
Mre11Q61216 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mre11Q61216 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.74■□□□□ 0.27
Mre11Q61216 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms