Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Gm27631-201ENSMUST00000184163 466 ntBASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Gm18766-201ENSMUST00000189811 808 ntBASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 AA619741-201ENSMUST00000195095 646 ntBASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Trav5d-4Q5R1F6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm22065-201ENSMUST00000103753 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm22066-201ENSMUST00000103761 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24932-201ENSMUST00000103763 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24115-201ENSMUST00000103799 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm22190-201ENSMUST00000103827 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm22191-201ENSMUST00000103831 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24721-201ENSMUST00000103849 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm28018-201ENSMUST00000103869 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm26399-201ENSMUST00000103937 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm25349-201ENSMUST00000177728 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm23616-201ENSMUST00000177797 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm25871-201ENSMUST00000177816 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24752-201ENSMUST00000178240 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24496-201ENSMUST00000178287 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm25649-201ENSMUST00000178476 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm25548-201ENSMUST00000178681 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm23147-201ENSMUST00000178841 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm26095-201ENSMUST00000179270 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm22171-201ENSMUST00000179283 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm23936-201ENSMUST00000179354 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm22619-201ENSMUST00000179516 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm25255-201ENSMUST00000179579 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24755-201ENSMUST00000179691 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm26506-201ENSMUST00000179692 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm25086-201ENSMUST00000179931 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm23243-201ENSMUST00000180047 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24659-201ENSMUST00000180212 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm24169-201ENSMUST00000180244 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm23689-201ENSMUST00000180354 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm27359-201ENSMUST00000184153 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm27785-201ENSMUST00000184268 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm27466-201ENSMUST00000184396 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm27703-201ENSMUST00000184836 110 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm29541-201ENSMUST00000191351 678 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm45453-201ENSMUST00000211758 853 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5d-4Q5R1F6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms