Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Mir698-201ENSMUST00000102164 109 ntBASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Gm11524-201ENSMUST00000119349 807 ntBASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Gm27772-201ENSMUST00000184900 187 ntBASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Gm15806-201ENSMUST00000120696 955 ntBASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Prpf38aQ4FK66 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Gm8584-201ENSMUST00000171982 758 ntBASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Gm9002-201ENSMUST00000178437 499 ntBASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf38aQ4FK66 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.28■□□□□ 0.2
Prpf38aQ4FK66 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms