Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43aQ3TL54 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.85□□□□□ -0.03
Trim43aQ3TL54 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43aQ3TL54 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Gm17271-201ENSMUST00000165535 355 ntBASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Gm27920-201ENSMUST00000183953 96 ntBASIC14.84□□□□□ -0.03
Trim43aQ3TL54 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Gm10175-201ENSMUST00000086013 645 ntBASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trim43aQ3TL54 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43aQ3TL54 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43aQ3TL54 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trim43aQ3TL54 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43aQ3TL54 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43aQ3TL54 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43aQ3TL54 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43aQ3TL54 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Gm27702-201ENSMUST00000184512 56 ntBASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.83□□□□□ -0.04
Trim43aQ3TL54 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms