Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Gm43630-201ENSMUST00000201550 776 ntBASIC14.18□□□□□ -0.14
Ebf1Q07802 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.18□□□□□ -0.14
Ebf1Q07802 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.18□□□□□ -0.14
Ebf1Q07802 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.18□□□□□ -0.14
Ebf1Q07802 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf1Q07802 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ebf1Q07802 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.17□□□□□ -0.14
Ebf1Q07802 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ebf1Q07802 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ebf1Q07802 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ebf1Q07802 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ebf1Q07802 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ebf1Q07802 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.17□□□□□ -0.14
Ebf1Q07802 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Gm12341-201ENSMUST00000119724 503 ntBASIC14.17□□□□□ -0.14
Ebf1Q07802 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ebf1Q07802 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.17□□□□□ -0.14
Ebf1Q07802 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ebf1Q07802 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ebf1Q07802 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf1Q07802 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.16□□□□□ -0.14
Ebf1Q07802 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.16□□□□□ -0.14
Ebf1Q07802 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Ebf1Q07802 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.16□□□□□ -0.14
Ebf1Q07802 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.16□□□□□ -0.14
Ebf1Q07802 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.16□□□□□ -0.14
Ebf1Q07802 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.16□□□□□ -0.14
Ebf1Q07802 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf1Q07802 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms