Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm37863-201ENSMUST00000194911 1457 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col9a1Q05722 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col9a1Q05722 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col9a1Q05722 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col9a1Q05722 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col9a1Q05722 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col9a1Q05722 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col9a1Q05722 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.71□□□□□ -0.22
Col9a1Q05722 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.71□□□□□ -0.22
Col9a1Q05722 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Gm15240-201ENSMUST00000118156 720 ntBASIC13.7□□□□□ -0.22
Col9a1Q05722 Gm14208-201ENSMUST00000119645 678 ntBASIC13.7□□□□□ -0.22
Col9a1Q05722 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Gm6152-201ENSMUST00000151704 340 ntBASIC13.7□□□□□ -0.22
Col9a1Q05722 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Gm38223-201ENSMUST00000194484 695 ntBASIC13.7□□□□□ -0.22
Col9a1Q05722 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.7□□□□□ -0.22
Col9a1Q05722 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col9a1Q05722 Dancr-204ENSMUST00000132389 2347 ntBASIC13.7□□□□□ -0.22
Col9a1Q05722 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col9a1Q05722 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.69□□□□□ -0.22
Col9a1Q05722 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.69□□□□□ -0.22
Col9a1Q05722 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col9a1Q05722 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col9a1Q05722 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col9a1Q05722 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm24541-201ENSMUST00000103871 96 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm12372-201ENSMUST00000121654 768 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.69□□□□□ -0.22
Col9a1Q05722 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm28180-201ENSMUST00000189608 722 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm44967-201ENSMUST00000207047 631 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm44554-201ENSMUST00000208738 147 ntBASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col9a1Q05722 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm13888-201ENSMUST00000119148 422 ntBASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm13570-201ENSMUST00000140763 309 ntBASIC13.68□□□□□ -0.22
Col9a1Q05722 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.68□□□□□ -0.22
Col9a1Q05722 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm5277-201ENSMUST00000164923 556 ntBASIC13.68□□□□□ -0.22
Col9a1Q05722 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col9a1Q05722 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.68□□□□□ -0.22
Col9a1Q05722 Gm20392-201ENSMUST00000173047 701 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms