Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim43cP86449 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim43cP86449 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim43cP86449 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim43cP86449 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim43cP86449 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.2■□□□□ 0.02
Trim43cP86449 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trim43cP86449 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim43cP86449 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.2■□□□□ 0.02
Trim43cP86449 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim43cP86449 Gm4875-201ENSMUST00000118257 786 ntBASIC15.2■□□□□ 0.02
Trim43cP86449 Gm15920-201ENSMUST00000118998 402 ntBASIC15.2■□□□□ 0.02
Trim43cP86449 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim43cP86449 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim43cP86449 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.2■□□□□ 0.02
Trim43cP86449 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.2■□□□□ 0.02
Trim43cP86449 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.2■□□□□ 0.02
Trim43cP86449 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim43cP86449 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim43cP86449 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim43cP86449 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim43cP86449 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim43cP86449 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Gm12585-201ENSMUST00000117307 290 ntBASIC15.19■□□□□ 0.02
Trim43cP86449 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.19■□□□□ 0.02
Trim43cP86449 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim43cP86449 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Gm29741-201ENSMUST00000192667 421 ntBASIC15.19■□□□□ 0.02
Trim43cP86449 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim43cP86449 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim43cP86449 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim43cP86449 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim43cP86449 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim43cP86449 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim43cP86449 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim43cP86449 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.18■□□□□ 0.02
Trim43cP86449 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.18■□□□□ 0.02
Trim43cP86449 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim43cP86449 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Trim43cP86449 Gm15240-201ENSMUST00000118156 720 ntBASIC15.18■□□□□ 0.02
Trim43cP86449 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim43cP86449 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim43cP86449 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.18■□□□□ 0.02
Trim43cP86449 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.18■□□□□ 0.02
Trim43cP86449 Gm44872-201ENSMUST00000207864 420 ntBASIC15.18■□□□□ 0.02
Trim43cP86449 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.18■□□□□ 0.02
Trim43cP86449 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim43cP86449 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim43cP86449 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim43cP86449 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms