Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shox2P70390 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Shox2P70390 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.82□□□□□ -0.2
Shox2P70390 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shox2P70390 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.82□□□□□ -0.2
Shox2P70390 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Shox2P70390 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shox2P70390 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shox2P70390 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shox2P70390 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shox2P70390 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Gm16026-204ENSMUST00000162652 683 ntBASIC13.82□□□□□ -0.2
Shox2P70390 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shox2P70390 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.82□□□□□ -0.2
Shox2P70390 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.82□□□□□ -0.2
Shox2P70390 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.82□□□□□ -0.2
Shox2P70390 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shox2P70390 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
Shox2P70390 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.82□□□□□ -0.2
Shox2P70390 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.82□□□□□ -0.2
Shox2P70390 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.82□□□□□ -0.2
Shox2P70390 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Shox2P70390 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shox2P70390 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Shox2P70390 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.81□□□□□ -0.2
Shox2P70390 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.81□□□□□ -0.2
Shox2P70390 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.81□□□□□ -0.2
Shox2P70390 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shox2P70390 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shox2P70390 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.81□□□□□ -0.2
Shox2P70390 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Gm11764-201ENSMUST00000120221 623 ntBASIC13.81□□□□□ -0.2
Shox2P70390 Gm12882-201ENSMUST00000121696 517 ntBASIC13.81□□□□□ -0.2
Shox2P70390 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.81□□□□□ -0.2
Shox2P70390 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.81□□□□□ -0.2
Shox2P70390 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.81□□□□□ -0.2
Shox2P70390 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.81□□□□□ -0.2
Shox2P70390 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.81□□□□□ -0.2
Shox2P70390 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shox2P70390 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Shox2P70390 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shox2P70390 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.81□□□□□ -0.2
Shox2P70390 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shox2P70390 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shox2P70390 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Shox2P70390 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shox2P70390 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms