Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.43■□□□□ 0.38
Vps33bP59016 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Gm12176-201ENSMUST00000121420 875 ntBASIC17.43■□□□□ 0.38
Vps33bP59016 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps33bP59016 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps33bP59016 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.43■□□□□ 0.38
Vps33bP59016 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.43■□□□□ 0.38
Vps33bP59016 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Gm5781-201ENSMUST00000219792 443 ntBASIC17.43■□□□□ 0.38
Vps33bP59016 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Vps33bP59016 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps33bP59016 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps33bP59016 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vps33bP59016 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.43■□□□□ 0.38
Vps33bP59016 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps33bP59016 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vps33bP59016 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vps33bP59016 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.42■□□□□ 0.38
Vps33bP59016 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Gm8805-201ENSMUST00000117848 313 ntBASIC17.42■□□□□ 0.38
Vps33bP59016 Gm14726-201ENSMUST00000120623 896 ntBASIC17.42■□□□□ 0.38
Vps33bP59016 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.42■□□□□ 0.38
Vps33bP59016 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.42■□□□□ 0.38
Vps33bP59016 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.42■□□□□ 0.38
Vps33bP59016 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vps33bP59016 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Vps33bP59016 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vps33bP59016 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.42■□□□□ 0.38
Vps33bP59016 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps33bP59016 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps33bP59016 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vps33bP59016 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vps33bP59016 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vps33bP59016 Gm14017-201ENSMUST00000121934 386 ntBASIC17.41■□□□□ 0.38
Vps33bP59016 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Gm22902-201ENSMUST00000158488 302 ntBASIC17.41■□□□□ 0.38
Vps33bP59016 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.41■□□□□ 0.38
Vps33bP59016 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.41■□□□□ 0.38
Vps33bP59016 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vps33bP59016 Gm4768-201ENSMUST00000206199 686 ntBASIC17.41■□□□□ 0.38
Vps33bP59016 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC17.41■□□□□ 0.38
Vps33bP59016 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Vps33bP59016 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps33bP59016 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vps33bP59016 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Vps33bP59016 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Vps33bP59016 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Gm24830-201ENSMUST00000102024 166 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC17.4■□□□□ 0.38
Vps33bP59016 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Gm25890-201ENSMUST00000177643 165 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Rnu1b2-201ENSMUST00000178073 165 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Rnu1b1-201ENSMUST00000178250 165 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Gm22614-201ENSMUST00000178300 165 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Gm22042-201ENSMUST00000082989 165 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Gm26232-201ENSMUST00000083360 166 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Gm24136-201ENSMUST00000083374 165 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Rnu1b6-201ENSMUST00000083839 166 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Gm26110-201ENSMUST00000083971 165 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.4■□□□□ 0.38
Vps33bP59016 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps33bP59016 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms