Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Msh6P54276 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Msh6P54276 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Gm12384-201ENSMUST00000119228 919 ntBASIC17.61■□□□□ 0.41
Msh6P54276 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh6P54276 Gm27572-201ENSMUST00000183702 255 ntBASIC17.61■□□□□ 0.41
Msh6P54276 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.61■□□□□ 0.41
Msh6P54276 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.61■□□□□ 0.41
Msh6P54276 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.61■□□□□ 0.41
Msh6P54276 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh6P54276 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.61■□□□□ 0.41
Msh6P54276 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.6■□□□□ 0.41
Msh6P54276 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.6■□□□□ 0.41
Msh6P54276 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.6■□□□□ 0.41
Msh6P54276 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Msh6P54276 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Gm5370-201ENSMUST00000187187 574 ntBASIC17.6■□□□□ 0.41
Msh6P54276 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.6■□□□□ 0.41
Msh6P54276 Gm7399-201ENSMUST00000032395 858 ntBASIC17.6■□□□□ 0.41
Msh6P54276 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Msh6P54276 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Msh6P54276 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.6■□□□□ 0.41
Msh6P54276 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh6P54276 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.59■□□□□ 0.41
Msh6P54276 Gm12485-201ENSMUST00000119641 291 ntBASIC17.59■□□□□ 0.41
Msh6P54276 Gm11803-201ENSMUST00000119966 444 ntBASIC17.59■□□□□ 0.41
Msh6P54276 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.59■□□□□ 0.41
Msh6P54276 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Msh6P54276 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.59■□□□□ 0.41
Msh6P54276 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Msh6P54276 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh6P54276 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.59■□□□□ 0.41
Msh6P54276 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Msh6P54276 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Msh6P54276 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh6P54276 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh6P54276 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh6P54276 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh6P54276 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh6P54276 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh6P54276 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh6P54276 Mir698-201ENSMUST00000102164 109 ntBASIC17.58■□□□□ 0.4
Msh6P54276 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Msh6P54276 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.58■□□□□ 0.4
Msh6P54276 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.58■□□□□ 0.4
Msh6P54276 Gm40466-201ENSMUST00000212174 422 ntBASIC17.58■□□□□ 0.4
Msh6P54276 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.58■□□□□ 0.4
Msh6P54276 Gm18473-201ENSMUST00000220543 868 ntBASIC17.58■□□□□ 0.4
Msh6P54276 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh6P54276 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Msh6P54276 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh6P54276 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh6P54276 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Msh6P54276 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Msh6P54276 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Msh6P54276 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.58■□□□□ 0.4
Msh6P54276 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Msh6P54276 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.57■□□□□ 0.4
Msh6P54276 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Gm15371-201ENSMUST00000117057 784 ntBASIC17.57■□□□□ 0.4
Msh6P54276 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Msh6P54276 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.57■□□□□ 0.4
Msh6P54276 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Gm38671-201ENSMUST00000200573 130 ntBASIC17.57■□□□□ 0.4
Msh6P54276 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Msh6P54276 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh6P54276 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms