Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdx1P52946 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdx1P52946 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdx1P52946 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdx1P52946 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdx1P52946 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.84□□□□□ -0.19
Pdx1P52946 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.84□□□□□ -0.19
Pdx1P52946 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.84□□□□□ -0.19
Pdx1P52946 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.84□□□□□ -0.19
Pdx1P52946 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.84□□□□□ -0.19
Pdx1P52946 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.84□□□□□ -0.19
Pdx1P52946 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pdx1P52946 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdx1P52946 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdx1P52946 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdx1P52946 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdx1P52946 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdx1P52946 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pdx1P52946 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
Pdx1P52946 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdx1P52946 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Pdx1P52946 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.83□□□□□ -0.2
Pdx1P52946 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.83□□□□□ -0.2
Pdx1P52946 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.83□□□□□ -0.2
Pdx1P52946 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.83□□□□□ -0.2
Pdx1P52946 Gm20949-201ENSMUST00000206478 952 ntBASIC13.83□□□□□ -0.2
Pdx1P52946 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.83□□□□□ -0.2
Pdx1P52946 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pdx1P52946 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Pdx1P52946 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pdx1P52946 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pdx1P52946 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdx1P52946 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Pdx1P52946 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pdx1P52946 Gm15487-201ENSMUST00000122373 465 ntBASIC13.82□□□□□ -0.2
Pdx1P52946 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.82□□□□□ -0.2
Pdx1P52946 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.82□□□□□ -0.2
Pdx1P52946 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Mir7023-201ENSMUST00000185093 64 ntBASIC13.82□□□□□ -0.2
Pdx1P52946 Gm21470-201ENSMUST00000187680 696 ntBASIC13.82□□□□□ -0.2
Pdx1P52946 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pdx1P52946 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.82□□□□□ -0.2
Pdx1P52946 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pdx1P52946 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pdx1P52946 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.82□□□□□ -0.2
Pdx1P52946 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdx1P52946 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdx1P52946 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms