Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
RoraP51448 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.25□□□□□ -0.29
RoraP51448 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
RoraP51448 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.25□□□□□ -0.29
RoraP51448 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.25□□□□□ -0.29
RoraP51448 Gm8515-201ENSMUST00000194852 576 ntBASIC13.25□□□□□ -0.29
RoraP51448 Gm45668-201ENSMUST00000211271 493 ntBASIC13.25□□□□□ -0.29
RoraP51448 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Gm6180-201ENSMUST00000065243 498 ntBASIC13.25□□□□□ -0.29
RoraP51448 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RoraP51448 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.25□□□□□ -0.29
RoraP51448 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RoraP51448 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.24□□□□□ -0.29
RoraP51448 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.24□□□□□ -0.29
RoraP51448 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.24□□□□□ -0.29
RoraP51448 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RoraP51448 Gm21470-201ENSMUST00000187680 696 ntBASIC13.24□□□□□ -0.29
RoraP51448 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.24□□□□□ -0.29
RoraP51448 Gm37917-201ENSMUST00000194711 392 ntBASIC13.24□□□□□ -0.29
RoraP51448 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Gm18018-201ENSMUST00000198273 408 ntBASIC13.24□□□□□ -0.29
RoraP51448 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.24□□□□□ -0.29
RoraP51448 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.24□□□□□ -0.29
RoraP51448 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Gm15823-201ENSMUST00000064305 670 ntBASIC13.24□□□□□ -0.29
RoraP51448 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.24□□□□□ -0.29
RoraP51448 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RoraP51448 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RoraP51448 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RoraP51448 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RoraP51448 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.23□□□□□ -0.29
RoraP51448 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
RoraP51448 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.23□□□□□ -0.29
RoraP51448 Gm23984-201ENSMUST00000157139 203 ntBASIC13.23□□□□□ -0.29
RoraP51448 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.23□□□□□ -0.29
RoraP51448 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.23□□□□□ -0.29
RoraP51448 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RoraP51448 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms