Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.69□□□□□ -0.22
Gli1P47806 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.69□□□□□ -0.22
Gli1P47806 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Gli1P47806 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Gli1P47806 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.69□□□□□ -0.22
Gli1P47806 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.69□□□□□ -0.22
Gli1P47806 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.69□□□□□ -0.22
Gli1P47806 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.69□□□□□ -0.22
Gli1P47806 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.69□□□□□ -0.22
Gli1P47806 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gli1P47806 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Gli1P47806 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gli1P47806 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.68□□□□□ -0.22
Gli1P47806 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gli1P47806 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.68□□□□□ -0.22
Gli1P47806 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.68□□□□□ -0.22
Gli1P47806 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gli1P47806 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gli1P47806 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gli1P47806 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gli1P47806 Gm12428-201ENSMUST00000119844 727 ntBASIC13.68□□□□□ -0.22
Gli1P47806 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.68□□□□□ -0.22
Gli1P47806 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.68□□□□□ -0.22
Gli1P47806 Gm18057-201ENSMUST00000208220 503 ntBASIC13.68□□□□□ -0.22
Gli1P47806 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.68□□□□□ -0.22
Gli1P47806 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.68□□□□□ -0.22
Gli1P47806 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.68□□□□□ -0.22
Gli1P47806 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gli1P47806 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Gli1P47806 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gli1P47806 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.67□□□□□ -0.22
Gli1P47806 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.67□□□□□ -0.22
Gli1P47806 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gli1P47806 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.67□□□□□ -0.22
Gli1P47806 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.67□□□□□ -0.22
Gli1P47806 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.67□□□□□ -0.22
Gli1P47806 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gli1P47806 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.67□□□□□ -0.22
Gli1P47806 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gli1P47806 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms