Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.31□□□□□ -0.12
Cxcl12P40224 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.31□□□□□ -0.12
Cxcl12P40224 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl12P40224 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.3□□□□□ -0.12
Cxcl12P40224 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl12P40224 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.3□□□□□ -0.12
Cxcl12P40224 Gm13786-201ENSMUST00000122371 333 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.3□□□□□ -0.12
Cxcl12P40224 Gm17376-201ENSMUST00000166016 84 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Gm37922-201ENSMUST00000195596 455 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 Nsd1-205ENSMUST00000224693 852 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cxcl12P40224 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.3□□□□□ -0.12
Cxcl12P40224 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl12P40224 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.3□□□□□ -0.12
Cxcl12P40224 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.3□□□□□ -0.12
Cxcl12P40224 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cxcl12P40224 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cxcl12P40224 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.29□□□□□ -0.12
Cxcl12P40224 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.29□□□□□ -0.12
Cxcl12P40224 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.29□□□□□ -0.12
Cxcl12P40224 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.29□□□□□ -0.12
Cxcl12P40224 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.29□□□□□ -0.12
Cxcl12P40224 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.29□□□□□ -0.12
Cxcl12P40224 Gm37489-201ENSMUST00000191883 159 ntBASIC14.29□□□□□ -0.12
Cxcl12P40224 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.29□□□□□ -0.12
Cxcl12P40224 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.29□□□□□ -0.12
Cxcl12P40224 Gm8227-201ENSMUST00000223306 571 ntBASIC14.29□□□□□ -0.12
Cxcl12P40224 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cxcl12P40224 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cxcl12P40224 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.29□□□□□ -0.12
Cxcl12P40224 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cxcl12P40224 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.29□□□□□ -0.12
Cxcl12P40224 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cxcl12P40224 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cxcl12P40224 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Gm20482-202ENSMUST00000174729 825 ntBASIC14.28□□□□□ -0.12
Cxcl12P40224 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.28□□□□□ -0.12
Cxcl12P40224 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.28□□□□□ -0.12
Cxcl12P40224 Gm29741-201ENSMUST00000192667 421 ntBASIC14.28□□□□□ -0.12
Cxcl12P40224 Gm6621-201ENSMUST00000193251 772 ntBASIC14.28□□□□□ -0.12
Cxcl12P40224 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.28□□□□□ -0.12
Cxcl12P40224 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms