Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Gm2213-201ENSMUST00000197485 688 ntBASIC12.05□□□□□ -0.48
Slc6a1P31648 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Gm5364-201ENSMUST00000216789 889 ntBASIC12.05□□□□□ -0.48
Slc6a1P31648 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.04□□□□□ -0.48
Slc6a1P31648 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.04□□□□□ -0.48
Slc6a1P31648 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.04□□□□□ -0.48
Slc6a1P31648 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.04□□□□□ -0.48
Slc6a1P31648 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm15590-201ENSMUST00000078419 552 ntBASIC12.04□□□□□ -0.48
Slc6a1P31648 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc6a1P31648 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc6a1P31648 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Slc6a1P31648 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.03□□□□□ -0.48
Slc6a1P31648 Gm15467-201ENSMUST00000120582 445 ntBASIC12.03□□□□□ -0.48
Slc6a1P31648 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.03□□□□□ -0.48
Slc6a1P31648 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Slc6a1P31648 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
Slc6a1P31648 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.03□□□□□ -0.48
Slc6a1P31648 Gm37153-201ENSMUST00000193637 231 ntBASIC12.03□□□□□ -0.48
Slc6a1P31648 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.03□□□□□ -0.48
Slc6a1P31648 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms