Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.37□□□□□ -0.11
Rb1P13405 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rb1P13405 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.36□□□□□ -0.11
Rb1P13405 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.36□□□□□ -0.11
Rb1P13405 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rb1P13405 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.36□□□□□ -0.11
Rb1P13405 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.36□□□□□ -0.11
Rb1P13405 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.36□□□□□ -0.11
Rb1P13405 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.36□□□□□ -0.11
Rb1P13405 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rb1P13405 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rb1P13405 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
Rb1P13405 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.35□□□□□ -0.11
Rb1P13405 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rb1P13405 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.35□□□□□ -0.11
Rb1P13405 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.35□□□□□ -0.11
Rb1P13405 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.35□□□□□ -0.11
Rb1P13405 Gm29667-201ENSMUST00000190817 490 ntBASIC14.35□□□□□ -0.11
Rb1P13405 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.35□□□□□ -0.11
Rb1P13405 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.35□□□□□ -0.11
Rb1P13405 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.35□□□□□ -0.11
Rb1P13405 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.35□□□□□ -0.11
Rb1P13405 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rb1P13405 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.34□□□□□ -0.11
Rb1P13405 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.34□□□□□ -0.11
Rb1P13405 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Rb1P13405 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rb1P13405 Gm3436-201ENSMUST00000179930 840 ntBASIC14.34□□□□□ -0.11
Rb1P13405 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.34□□□□□ -0.11
Rb1P13405 Gm8515-201ENSMUST00000194852 576 ntBASIC14.34□□□□□ -0.11
Rb1P13405 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.34□□□□□ -0.11
Rb1P13405 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms