Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC9.59□□□□□ -0.87
Smim1P0C8K7 Gm5184-201ENSMUST00000220417 1702 ntBASIC9.59□□□□□ -0.87
Smim1P0C8K7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Mir770-201ENSMUST00000103252 94 ntBASIC9.59□□□□□ -0.87
Smim1P0C8K7 Gm15593-201ENSMUST00000122085 1008 ntBASIC9.59□□□□□ -0.87
Smim1P0C8K7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC9.59□□□□□ -0.87
Smim1P0C8K7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.59□□□□□ -0.87
Smim1P0C8K7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Tcf21-202ENSMUST00000218002 1788 ntBASIC9.59□□□□□ -0.87
Smim1P0C8K7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smim1P0C8K7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Smim1P0C8K7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gm12527-201ENSMUST00000117967 564 ntBASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gm21559-201ENSMUST00000220638 855 ntBASIC9.58□□□□□ -0.88
Smim1P0C8K7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gm8587-201ENSMUST00000076538 843 ntBASIC9.58□□□□□ -0.88
Smim1P0C8K7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.58□□□□□ -0.88
Smim1P0C8K7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim1P0C8K7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms