Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa3P02831 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.76□□□□□ -0.53
Hoxa3P02831 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.75□□□□□ -0.53
Hoxa3P02831 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Hoxa3P02831 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.75□□□□□ -0.53
Hoxa3P02831 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Hoxa3P02831 AA619741-201ENSMUST00000195095 646 ntBASIC11.75□□□□□ -0.53
Hoxa3P02831 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa3P02831 Gm9229-201ENSMUST00000222777 126 ntBASIC11.75□□□□□ -0.53
Hoxa3P02831 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.75□□□□□ -0.53
Hoxa3P02831 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.75□□□□□ -0.53
Hoxa3P02831 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa3P02831 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hoxa3P02831 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa3P02831 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa3P02831 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.75□□□□□ -0.53
Hoxa3P02831 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.75□□□□□ -0.53
Hoxa3P02831 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hoxa3P02831 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa3P02831 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Hoxa3P02831 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.74□□□□□ -0.53
Hoxa3P02831 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.74□□□□□ -0.53
Hoxa3P02831 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.74□□□□□ -0.53
Hoxa3P02831 Gm6916-202ENSMUST00000205523 195 ntBASIC11.74□□□□□ -0.53
Hoxa3P02831 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.74□□□□□ -0.53
Hoxa3P02831 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.74□□□□□ -0.53
Hoxa3P02831 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa3P02831 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.74□□□□□ -0.53
Hoxa3P02831 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hoxa3P02831 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Hoxa3P02831 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hoxa3P02831 Gm22189-201ENSMUST00000103822 86 ntBASIC11.73□□□□□ -0.53
Hoxa3P02831 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa3P02831 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms