Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cops4O88544 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cops4O88544 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cops4O88544 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cops4O88544 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cops4O88544 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cops4O88544 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cops4O88544 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cops4O88544 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cops4O88544 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cops4O88544 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cops4O88544 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Cops4O88544 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
Cops4O88544 Gm25925-201ENSMUST00000158314 306 ntBASIC12.93□□□□□ -0.34
Cops4O88544 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.93□□□□□ -0.34
Cops4O88544 Gm27300-201ENSMUST00000184085 97 ntBASIC12.93□□□□□ -0.34
Cops4O88544 Gm27335-201ENSMUST00000184758 97 ntBASIC12.93□□□□□ -0.34
Cops4O88544 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.93□□□□□ -0.34
Cops4O88544 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.93□□□□□ -0.34
Cops4O88544 Gm9182-201ENSMUST00000217829 639 ntBASIC12.93□□□□□ -0.34
Cops4O88544 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cops4O88544 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cops4O88544 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.93□□□□□ -0.34
Cops4O88544 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cops4O88544 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.92□□□□□ -0.34
Cops4O88544 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Cops4O88544 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.92□□□□□ -0.34
Cops4O88544 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cops4O88544 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cops4O88544 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.92□□□□□ -0.34
Cops4O88544 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cops4O88544 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cops4O88544 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.92□□□□□ -0.34
Cops4O88544 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.92□□□□□ -0.34
Cops4O88544 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cops4O88544 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cops4O88544 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.91□□□□□ -0.34
Cops4O88544 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Cops4O88544 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.91□□□□□ -0.34
Cops4O88544 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cops4O88544 Gm2651-201ENSMUST00000203560 838 ntBASIC12.91□□□□□ -0.34
Cops4O88544 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.91□□□□□ -0.34
Cops4O88544 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.91□□□□□ -0.34
Cops4O88544 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms