Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Gm10226O88253 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Gm10226O88253 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.77□□□□□ -0.69
Gm10226O88253 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.77□□□□□ -0.69
Gm10226O88253 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Gm8515-201ENSMUST00000194852 576 ntBASIC10.77□□□□□ -0.69
Gm10226O88253 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.77□□□□□ -0.69
Gm10226O88253 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.77□□□□□ -0.69
Gm10226O88253 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Gm10226O88253 Gm45668-201ENSMUST00000211271 493 ntBASIC10.77□□□□□ -0.69
Gm10226O88253 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.77□□□□□ -0.69
Gm10226O88253 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.77□□□□□ -0.69
Gm10226O88253 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Gm10226O88253 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm10226O88253 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.76□□□□□ -0.69
Gm10226O88253 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Gm10226O88253 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Gm10226O88253 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.76□□□□□ -0.69
Gm10226O88253 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.76□□□□□ -0.69
Gm10226O88253 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.76□□□□□ -0.69
Gm10226O88253 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Mir6392-201ENSMUST00000184924 108 ntBASIC10.76□□□□□ -0.69
Gm10226O88253 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Gm18018-201ENSMUST00000198273 408 ntBASIC10.76□□□□□ -0.69
Gm10226O88253 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.76□□□□□ -0.69
Gm10226O88253 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.76□□□□□ -0.69
Gm10226O88253 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Gm10226O88253 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Gm10226O88253 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Gm10226O88253 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Gm10226O88253 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.75□□□□□ -0.69
Gm10226O88253 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Gm10226O88253 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.75□□□□□ -0.69
Gm10226O88253 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.75□□□□□ -0.69
Gm10226O88253 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Gm10226O88253 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Gm10226O88253 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Gm12341-201ENSMUST00000119724 503 ntBASIC10.75□□□□□ -0.69
Gm10226O88253 Gm14928-201ENSMUST00000120198 477 ntBASIC10.75□□□□□ -0.69
Gm10226O88253 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Gm10226O88253 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.75□□□□□ -0.69
Gm10226O88253 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Gm10226O88253 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms