Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Dkk1O54908 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Dkk1O54908 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.74□□□□□ -0.37
Dkk1O54908 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Dkk1O54908 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Dkk1O54908 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Dkk1O54908 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Dkk1O54908 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Gm45177-201ENSMUST00000209104 2307 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.73□□□□□ -0.37
Dkk1O54908 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.73□□□□□ -0.37
Dkk1O54908 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Dkk1O54908 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Dkk1O54908 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Gm37317-201ENSMUST00000192198 1024 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Gm38333-201ENSMUST00000193608 604 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Gm6236-201ENSMUST00000193785 1009 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Gm5684-201ENSMUST00000198419 961 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.73□□□□□ -0.37
Dkk1O54908 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.73□□□□□ -0.37
Dkk1O54908 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC12.73□□□□□ -0.37
Dkk1O54908 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC12.73□□□□□ -0.37
Dkk1O54908 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.73□□□□□ -0.37
Dkk1O54908 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 AC132833.4-201ENSMUST00000228313 203 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Dkk1O54908 Efs-202ENSMUST00000227037 2540 ntBASIC12.73□□□□□ -0.37
Dkk1O54908 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.73□□□□□ -0.37
Dkk1O54908 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.73□□□□□ -0.37
Dkk1O54908 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Dkk1O54908 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.72□□□□□ -0.37
Dkk1O54908 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Dkk1O54908 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Dkk1O54908 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Dkk1O54908 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms