Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Npc1O35604 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npc1O35604 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.67□□□□□ -0.22
Npc1O35604 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.67□□□□□ -0.22
Npc1O35604 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Npc1O35604 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.67□□□□□ -0.22
Npc1O35604 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Npc1O35604 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.67□□□□□ -0.22
Npc1O35604 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.67□□□□□ -0.22
Npc1O35604 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Npc1O35604 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Gm43703-201ENSMUST00000200523 763 ntBASIC13.67□□□□□ -0.22
Npc1O35604 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.67□□□□□ -0.22
Npc1O35604 Gm5425-201ENSMUST00000214125 459 ntBASIC13.67□□□□□ -0.22
Npc1O35604 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Npc1O35604 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.67□□□□□ -0.22
Npc1O35604 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Npc1O35604 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.67□□□□□ -0.22
Npc1O35604 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Npc1O35604 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Npc1O35604 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Npc1O35604 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Npc1O35604 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Npc1O35604 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Npc1O35604 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.66□□□□□ -0.22
Npc1O35604 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.66□□□□□ -0.22
Npc1O35604 Gm15487-201ENSMUST00000122373 465 ntBASIC13.66□□□□□ -0.22
Npc1O35604 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.66□□□□□ -0.22
Npc1O35604 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.66□□□□□ -0.22
Npc1O35604 Gm5866-201ENSMUST00000177881 973 ntBASIC13.66□□□□□ -0.22
Npc1O35604 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Npc1O35604 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Npc1O35604 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Npc1O35604 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Syt7-204ENSMUST00000223586 1344 ntBASIC13.65□□□□□ -0.22
Npc1O35604 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Npc1O35604 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Npc1O35604 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Npc1O35604 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.65□□□□□ -0.22
Npc1O35604 Gm4875-201ENSMUST00000118257 786 ntBASIC13.65□□□□□ -0.22
Npc1O35604 Gm15393-201ENSMUST00000120499 219 ntBASIC13.65□□□□□ -0.22
Npc1O35604 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.65□□□□□ -0.22
Npc1O35604 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Npc1O35604 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.65□□□□□ -0.22
Npc1O35604 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Npc1O35604 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Npc1O35604 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.65□□□□□ -0.22
Npc1O35604 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms