Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.34□□□□□ -0.11
Ptch2O35595 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.34□□□□□ -0.11
Ptch2O35595 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.34□□□□□ -0.11
Ptch2O35595 Gm6266-201ENSMUST00000203844 806 ntBASIC14.34□□□□□ -0.11
Ptch2O35595 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ptch2O35595 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.34□□□□□ -0.11
Ptch2O35595 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.34□□□□□ -0.11
Ptch2O35595 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.34□□□□□ -0.11
Ptch2O35595 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ptch2O35595 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptch2O35595 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.33□□□□□ -0.11
Ptch2O35595 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.33□□□□□ -0.11
Ptch2O35595 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ptch2O35595 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptch2O35595 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptch2O35595 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.33□□□□□ -0.12
Ptch2O35595 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.33□□□□□ -0.12
Ptch2O35595 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.33□□□□□ -0.12
Ptch2O35595 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptch2O35595 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.32□□□□□ -0.12
Ptch2O35595 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ptch2O35595 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ptch2O35595 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Gm15240-201ENSMUST00000118156 720 ntBASIC14.32□□□□□ -0.12
Ptch2O35595 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Gm4804-201ENSMUST00000182234 999 ntBASIC14.32□□□□□ -0.12
Ptch2O35595 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.32□□□□□ -0.12
Ptch2O35595 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.32□□□□□ -0.12
Ptch2O35595 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ptch2O35595 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptch2O35595 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.31□□□□□ -0.12
Ptch2O35595 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ptch2O35595 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ptch2O35595 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.31□□□□□ -0.12
Ptch2O35595 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Gm18307-201ENSMUST00000206864 949 ntBASIC14.31□□□□□ -0.12
Ptch2O35595 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.31□□□□□ -0.12
Ptch2O35595 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ptch2O35595 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ptch2O35595 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.31□□□□□ -0.12
Ptch2O35595 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms