Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm12384-201ENSMUST00000119228 919 ntBASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 Gm16479-201ENSMUST00000121706 932 ntBASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcf11G3X9Z4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Gm6447-201ENSMUST00000118905 835 ntBASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 AC159896.2-201ENSMUST00000214753 269 ntBASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 AC154319.1-201ENSMUST00000216330 312 ntBASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Gm4935-201ENSMUST00000221316 1198 ntBASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 AL589735.1-201ENSMUST00000224353 270 ntBASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcf11G3X9Z4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcf11G3X9Z4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC20.83■□□□□ 0.92
Pcf11G3X9Z4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcf11G3X9Z4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcf11G3X9Z4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcf11G3X9Z4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC20.83■□□□□ 0.92
Pcf11G3X9Z4 Gm45684-201ENSMUST00000210244 1571 ntBASIC20.83■□□□□ 0.92
Pcf11G3X9Z4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcf11G3X9Z4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Gm16202-201ENSMUST00000117532 544 ntBASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 AC133598.1-201ENSMUST00000224327 660 ntBASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
Pcf11G3X9Z4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Gm5850-201ENSMUST00000192923 1206 ntBASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Mmp14-206ENSMUST00000225641 3238 ntBASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Gm6203-201ENSMUST00000209575 1342 ntBASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcf11G3X9Z4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm6013-201ENSMUST00000212264 699 ntBASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm7172-201ENSMUST00000218047 1152 ntBASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Gm45930-201ENSMUST00000221330 292 ntBASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcf11G3X9Z4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms