Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim55G3X8Y1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim55G3X8Y1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim55G3X8Y1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim55G3X8Y1 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.33□□□□□ -0.11
Trim55G3X8Y1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim55G3X8Y1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim55G3X8Y1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim55G3X8Y1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim55G3X8Y1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim55G3X8Y1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Gm17807-201ENSMUST00000186869 298 ntBASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Gm17971-201ENSMUST00000190239 806 ntBASIC14.33□□□□□ -0.12
Trim55G3X8Y1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms