Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm43094-201ENSMUST00000196549 921 ntBASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gm19184-201ENSMUST00000196798 928 ntBASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gm18027-201ENSMUST00000218947 619 ntBASIC12.53□□□□□ -0.4
Shank1D3YZU1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.53□□□□□ -0.4
Shank1D3YZU1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gm29127-201ENSMUST00000188304 517 ntBASIC12.53□□□□□ -0.4
Shank1D3YZU1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shank1D3YZU1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.52□□□□□ -0.4
Shank1D3YZU1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.52□□□□□ -0.4
Shank1D3YZU1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.52□□□□□ -0.4
Shank1D3YZU1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.52□□□□□ -0.4
Shank1D3YZU1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Gm21470-201ENSMUST00000187680 696 ntBASIC12.52□□□□□ -0.4
Shank1D3YZU1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Shank1D3YZU1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.52□□□□□ -0.41
Shank1D3YZU1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.52□□□□□ -0.41
Shank1D3YZU1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Shank1D3YZU1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Gm40466-201ENSMUST00000212174 422 ntBASIC12.52□□□□□ -0.41
Shank1D3YZU1 Gm45930-201ENSMUST00000221330 292 ntBASIC12.52□□□□□ -0.41
Shank1D3YZU1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shank1D3YZU1 Efs-202ENSMUST00000227037 2540 ntBASIC12.52□□□□□ -0.41
Shank1D3YZU1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shank1D3YZU1 Gm13612-201ENSMUST00000119276 390 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms