Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.8□□□□□ -0.52
Col6a4A2AX52 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm8749-201ENSMUST00000117737 331 ntBASIC11.8□□□□□ -0.52
Col6a4A2AX52 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm19184-201ENSMUST00000196798 928 ntBASIC11.8□□□□□ -0.52
Col6a4A2AX52 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.8□□□□□ -0.52
Col6a4A2AX52 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a4A2AX52 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.79□□□□□ -0.52
Col6a4A2AX52 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Gm43094-201ENSMUST00000196549 921 ntBASIC11.79□□□□□ -0.52
Col6a4A2AX52 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Gm3961-201ENSMUST00000204425 994 ntBASIC11.79□□□□□ -0.52
Col6a4A2AX52 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.79□□□□□ -0.52
Col6a4A2AX52 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a4A2AX52 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Gm16570-201ENSMUST00000161951 436 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Gm43118-201ENSMUST00000199149 775 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 Gm18027-201ENSMUST00000218947 619 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Gm15240-201ENSMUST00000118156 720 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Gm27572-201ENSMUST00000183702 255 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Gm5425-201ENSMUST00000214125 459 ntBASIC11.78□□□□□ -0.52
Col6a4A2AX52 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a4A2AX52 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms