Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col9a3A2ACT7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col9a3A2ACT7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col9a3A2ACT7 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.58□□□□□ -0.23
Col9a3A2ACT7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col9a3A2ACT7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col9a3A2ACT7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col9a3A2ACT7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Proscos-202ENSMUST00000178990 666 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Gm27514-201ENSMUST00000183692 110 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Gm5370-201ENSMUST00000187187 574 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Gm18054-201ENSMUST00000207539 555 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Gm9823-201ENSMUST00000051212 327 ntBASIC13.58□□□□□ -0.24
Col9a3A2ACT7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Col9a3A2ACT7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Gm29741-201ENSMUST00000192667 421 ntBASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Gm45880-201ENSMUST00000213041 853 ntBASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Gm5161-201ENSMUST00000075243 853 ntBASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col9a3A2ACT7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Mir698-201ENSMUST00000102164 109 ntBASIC13.56□□□□□ -0.24
Col9a3A2ACT7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Gm27331-201ENSMUST00000183705 60 ntBASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col9a3A2ACT7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a3A2ACT7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a3A2ACT7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a3A2ACT7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col9a3A2ACT7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms