Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm38294-201ENSMUST00000192831 381 ntBASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Dupd1-202ENSMUST00000224735 548 ntBASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lnp1A0A1B0GSK3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm8410-201ENSMUST00000117225 605 ntBASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm28630-201ENSMUST00000187806 498 ntBASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 AA619741-201ENSMUST00000195095 646 ntBASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lnp1A0A1B0GSK3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lnp1A0A1B0GSK3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lnp1A0A1B0GSK3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lnp1A0A1B0GSK3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Lnp1A0A1B0GSK3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lnp1A0A1B0GSK3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Lnp1A0A1B0GSK3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lnp1A0A1B0GSK3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lnp1A0A1B0GSK3 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.64□□□□□ -0.55
Lnp1A0A1B0GSK3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lnp1A0A1B0GSK3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms