Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.47□□□□□ -0.57
Trav18A0A075B656 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.47□□□□□ -0.57
Trav18A0A075B656 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Gm2810-201ENSMUST00000118681 990 ntBASIC11.47□□□□□ -0.57
Trav18A0A075B656 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Gm18737-201ENSMUST00000173594 937 ntBASIC11.47□□□□□ -0.57
Trav18A0A075B656 Gm18057-201ENSMUST00000208220 503 ntBASIC11.47□□□□□ -0.57
Trav18A0A075B656 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.47□□□□□ -0.57
Trav18A0A075B656 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav18A0A075B656 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm11779-201ENSMUST00000118541 368 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm14494-201ENSMUST00000118786 435 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm11745-201ENSMUST00000121669 448 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm29310-201ENSMUST00000185468 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21825-201ENSMUST00000185728 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm29109-201ENSMUST00000185895 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21896-201ENSMUST00000186520 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21873-201ENSMUST00000186728 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21794-201ENSMUST00000187056 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21880-201ENSMUST00000187275 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21826-201ENSMUST00000187451 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21198-201ENSMUST00000188393 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21749-201ENSMUST00000189343 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21901-201ENSMUST00000189568 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm29424-201ENSMUST00000189716 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm28599-201ENSMUST00000189838 694 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21867-201ENSMUST00000189917 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm29269-201ENSMUST00000190087 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21722-201ENSMUST00000190153 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm28423-201ENSMUST00000190701 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21899-201ENSMUST00000190745 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21910-201ENSMUST00000191163 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21849-201ENSMUST00000191571 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm28678-201ENSMUST00000191593 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm20910-201ENSMUST00000193268 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Gm21871-201ENSMUST00000194621 696 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.46□□□□□ -0.57
Trav18A0A075B656 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav18A0A075B656 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav18A0A075B656 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms