Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Prpf40aQ9R1C7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Prpf40aQ9R1C7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Prpf40aQ9R1C7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.46■□□□□ 0.06
Prpf40aQ9R1C7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Prpf40aQ9R1C7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Prpf40aQ9R1C7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Prpf40aQ9R1C7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gm13616-201ENSMUST00000120600 222 ntBASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gm12882-201ENSMUST00000121696 517 ntBASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 AA619741-201ENSMUST00000195095 646 ntBASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Prpf40aQ9R1C7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Gm8410-201ENSMUST00000117225 605 ntBASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Gm22175-201ENSMUST00000175007 78 ntBASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40aQ9R1C7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Gm25144-201ENSMUST00000179561 110 ntBASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Gm25352-201ENSMUST00000179815 110 ntBASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Gm45453-201ENSMUST00000211758 853 ntBASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40aQ9R1C7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms