Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf4Q9QZS2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Gm4535-201ENSMUST00000182274 558 ntBASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Gm10355-201ENSMUST00000097146 517 ntBASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf4Q9QZS2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Gm7153-201ENSMUST00000117092 455 ntBASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Gm12644-201ENSMUST00000119935 606 ntBASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Gm10275-202ENSMUST00000168697 495 ntBASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Gm10275-201ENSMUST00000092620 635 ntBASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf4Q9QZS2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rnf4Q9QZS2 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.15□□□□□ -0.15
Rnf4Q9QZS2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rnf4Q9QZS2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rnf4Q9QZS2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rnf4Q9QZS2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf4Q9QZS2 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms