Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
U2af1Q9D883 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2af1Q9D883 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
U2af1Q9D883 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
U2af1Q9D883 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.41■□□□□ 0.54
U2af1Q9D883 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
U2af1Q9D883 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.41■□□□□ 0.54
U2af1Q9D883 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.41■□□□□ 0.54
U2af1Q9D883 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.41■□□□□ 0.54
U2af1Q9D883 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.41■□□□□ 0.54
U2af1Q9D883 Gm17795-201ENSMUST00000214505 757 ntBASIC18.41■□□□□ 0.54
U2af1Q9D883 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
U2af1Q9D883 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
U2af1Q9D883 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1Q9D883 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.4■□□□□ 0.54
U2af1Q9D883 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Gm8927-201ENSMUST00000181978 981 ntBASIC18.4■□□□□ 0.54
U2af1Q9D883 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.4■□□□□ 0.54
U2af1Q9D883 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.4■□□□□ 0.54
U2af1Q9D883 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Gm3222-201ENSMUST00000071282 990 ntBASIC18.4■□□□□ 0.54
U2af1Q9D883 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
U2af1Q9D883 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
U2af1Q9D883 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.4■□□□□ 0.54
U2af1Q9D883 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1Q9D883 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
U2af1Q9D883 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
U2af1Q9D883 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
U2af1Q9D883 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
U2af1Q9D883 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
U2af1Q9D883 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Gm15240-201ENSMUST00000118156 720 ntBASIC18.39■□□□□ 0.53
U2af1Q9D883 Gm13385-201ENSMUST00000121089 220 ntBASIC18.39■□□□□ 0.53
U2af1Q9D883 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.39■□□□□ 0.53
U2af1Q9D883 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Gm5425-201ENSMUST00000214125 459 ntBASIC18.39■□□□□ 0.53
U2af1Q9D883 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.39■□□□□ 0.53
U2af1Q9D883 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1Q9D883 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms