Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Gm43347-201ENSMUST00000200226 580 ntBASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Gm6376-201ENSMUST00000209407 580 ntBASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Gm9182-201ENSMUST00000217829 639 ntBASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hdhd3Q9CYW4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hdhd3Q9CYW4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Gm7230-201ENSMUST00000173026 815 ntBASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hdhd3Q9CYW4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.4□□□□□ -0.59
Hdhd3Q9CYW4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Hdhd3Q9CYW4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Hdhd3Q9CYW4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hdhd3Q9CYW4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hdhd3Q9CYW4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hdhd3Q9CYW4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hdhd3Q9CYW4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms