Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Gm8749-201ENSMUST00000117737 331 ntBASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RTRAFQ9CQE8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Gm13836-201ENSMUST00000121159 501 ntBASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Olfr129-201ENSMUST00000122318 993 ntBASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Gm27742-201ENSMUST00000184667 60 ntBASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTRAFQ9CQE8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTRAFQ9CQE8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms