Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Gm27701-201ENSMUST00000184498 110 ntBASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Gm5279-201ENSMUST00000199575 745 ntBASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb18Q91Y02 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Gm28911-201ENSMUST00000188837 117 ntBASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Gm6266-201ENSMUST00000203844 806 ntBASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Gm5425-201ENSMUST00000214125 459 ntBASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb18Q91Y02 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.65□□□□□ -0.07
Pcdhb18Q91Y02 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Gm17150-201ENSMUST00000165577 381 ntBASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Gm44719-201ENSMUST00000206404 149 ntBASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb18Q91Y02 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms