Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb6Q91XZ4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Gm6888-201ENSMUST00000221983 706 ntBASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.39□□□□□ -0.11
Pcdhb6Q91XZ4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gm14767-201ENSMUST00000121559 586 ntBASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gm21470-201ENSMUST00000187680 696 ntBASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gm44344-201ENSMUST00000200287 129 ntBASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gm43703-201ENSMUST00000200523 763 ntBASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Mir497b-201ENSMUST00000093601 125 ntBASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb6Q91XZ4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb6Q91XZ4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms