Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.57□□□□□ -0.24
Pcdhga11Q91XY8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Gm8396-201ENSMUST00000057361 823 ntBASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.56□□□□□ -0.24
Pcdhga11Q91XY8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Gm44608-201ENSMUST00000206827 855 ntBASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga11Q91XY8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms