Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim60Q8VI40 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm29310-201ENSMUST00000185468 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21825-201ENSMUST00000185728 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm29109-201ENSMUST00000185895 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21896-201ENSMUST00000186520 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21873-201ENSMUST00000186728 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21794-201ENSMUST00000187056 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21880-201ENSMUST00000187275 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21826-201ENSMUST00000187451 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21198-201ENSMUST00000188393 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21749-201ENSMUST00000189343 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21901-201ENSMUST00000189568 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm29424-201ENSMUST00000189716 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm28599-201ENSMUST00000189838 694 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21867-201ENSMUST00000189917 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm29269-201ENSMUST00000190087 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21722-201ENSMUST00000190153 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm28423-201ENSMUST00000190701 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21899-201ENSMUST00000190745 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21910-201ENSMUST00000191163 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21849-201ENSMUST00000191571 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm28678-201ENSMUST00000191593 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm20910-201ENSMUST00000193268 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm21871-201ENSMUST00000194621 696 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Gm45612-201ENSMUST00000211320 160 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim60Q8VI40 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.5□□□□□ -0.09
Trim60Q8VI40 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim60Q8VI40 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.49□□□□□ -0.09
Trim60Q8VI40 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.49□□□□□ -0.09
Trim60Q8VI40 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.49□□□□□ -0.09
Trim60Q8VI40 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.49□□□□□ -0.09
Trim60Q8VI40 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim60Q8VI40 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.48□□□□□ -0.09
Trim60Q8VI40 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.48□□□□□ -0.09
Trim60Q8VI40 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 AA543401-201ENSMUST00000164248 1269 ntBASIC14.48□□□□□ -0.09
Trim60Q8VI40 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Gm2445-201ENSMUST00000182798 989 ntBASIC14.48□□□□□ -0.09
Trim60Q8VI40 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.48□□□□□ -0.09
Trim60Q8VI40 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms